U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    c11.1 c11.1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 53436, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    c11.1provided by FlyBase
    Official Full Name
    c11.1provided by FlyBase
    Primary source
    FLYBASE:FBgn0040236
    Locus tag
    Dmel_CG12132
    See related
    AllianceGenome:FB:FBgn0040236
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    C11.1; CG1213; CG12132; Dmel\CG12132
    Summary
    Located in Golgi apparatus and late endosome. Is expressed in adult head and organism. Orthologous to several human genes including MROH1 (maestro heat like repeat family member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See c11.1 in Genome Data Viewer
    Location:
    8D4-8D5; 1-27 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9275318..9283117, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9169351..9177150, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene CXXC finger protein 1 Neighboring gene aladin Neighboring gene lozenge Neighboring gene long non-coding RNA:CR44534

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Yan regulates Lozenge during Drosophila eye development. Behan KJ, et al. Dev Genes Evol, 2002 Jul. PMID 12111211
    2. Alternative splicing removes an Ets interaction domain from Lozenge during Drosophila eye development. Jackson Behan K, et al. Dev Genes Evol, 2005 Aug. PMID 15868204
    3. Genome-wide analysis of nuclear mRNA export pathways in Drosophila. Herold A, et al. EMBO J, 2003 May 15. PMID 12743041, Free PMC Article
    4. Chromosomal elements evolve at different rates in the Drosophila genome. González J, et al. Genetics, 2002 Jul. PMID 12136017, Free PMC Article
    5. Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. Page AR, et al. EMBO J, 2005 Dec 21. PMID 16369566, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in late endosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    c11.1
    Names
    CG12132-PA
    CG12132-PB
    c11.1-PA
    c11.1-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      9275318..9283117 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298121.1 → NP_001285050.1  c11.1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285050.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NHY0, Q9W350

    2. NM_144349.3 → NP_652606.1  c11.1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652606.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NHY0, Q9W350
      Related
      FBpp0071261
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9NHY0 Q9NHY0
    Q9W350 Q9W350

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools