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    Msr-110 Msr-110 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38629, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Msr-110provided by FlyBase
    Official Full Name
    Msr-110provided by FlyBase
    Primary source
    FLYBASE:FBgn0015766
    Locus tag
    Dmel_CG10596
    See related
    AllianceGenome:FB:FBgn0015766
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG10596; Dmel\CG10596; MSR-110
    Summary
    Predicted to be located in membrane. Predicted to be active in nucleolus. Is expressed in several structures, including adult head; anal pad; anal pad primordium; epidermis; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Msr-110 in Genome Data Viewer
    Location:
    64D3-64D3; 3-14 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (5566919..5577348, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (5560019..5570448, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene severas Neighboring gene bc10 Neighboring gene small non-coding RNA 357 Neighboring gene lethal (3) persistent salivary gland 2 Neighboring gene spook Neighboring gene Alkaline phosphatase 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Selection and characterization of sequences with high affinity for the engrailed protein of Drosophila. Saenz-Robles MT, et al. Mech Dev, 1995 Oct. PMID 8562421
    2. Direct control of somatic stem cell proliferation factors by the Drosophila testis stem cell niche. Albert EA, et al. Development, 2018 Sep 3. PMID 30002131
    3. Target-specific requirements for enhancers of decapping in miRNA-mediated gene silencing. Eulalio A, et al. Genes Dev, 2007 Oct 15. PMID 17901217, Free PMC Article
    4. Two independent duplications forming the Cyp307a genes in Drosophila. Sztal T, et al. Insect Biochem Mol Biol, 2007 Oct. PMID 17785192
    5. Isolation of microRNA targets by miRNP immunopurification. Easow G, et al. RNA, 2007 Aug. PMID 17592038, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Msr-110
    Names
    CG10596-PA
    CG10596-PB
    CG10596-PC
    CG10596-PD
    Msr-110-PA
    Msr-110-PB
    Msr-110-PC
    Msr-110-PD
    engrailed nuclear homeoprotein-regulated gene

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      5566919..5577348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300013.1 → NP_001286942.1  Msr-110, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286942.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAN7, X2JCI8
      Conserved Domains (1) summary
      pfam12540
      Location:225 → 359
      DUF3736; Protein of unknown function (DUF3736)

    2. NM_139716.3 → NP_647973.1  Msr-110, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647973.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F0JAN7, Q26459
      Related
      FBpp0076838
      Conserved Domains (1) summary
      pfam12540
      Location:228 → 362
      DUF3736; Protein of unknown function (DUF3736)

    3. NM_168123.2 → NP_729077.1  Msr-110, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729077.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGD4, Q9VRM5
      Related
      FBpp0076837
      Conserved Domains (1) summary
      pfam12540
      Location:237 → 371
      DUF3736; Protein of unknown function (DUF3736)

    4. NM_168124.2 → NP_729078.1  Msr-110, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729078.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGD4, Q8IQ63
      Related
      FBpp0076839
      Conserved Domains (1) summary
      pfam12540
      Location:245 → 379
      DUF3736; Protein of unknown function (DUF3736)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q26459 Q26459
    Q8IGD4 Q8IGD4
    Q8IQ63 Q8IQ63
    Q9VRM5 Q9VRM5
    X2JCI8 X2JCI8

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