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    CG17294 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34155, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17294provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032032
    Locus tag
    Dmel_CG17294
    See related
    AllianceGenome:FB:FBgn0032032
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    15010468; Dmel\CG17294; Phos17294
    Summary
    Predicted to enable phosphatase activity. Predicted to be active in cytoplasm. Orthologous to human HDHD2 (haloacid dehalogenase like hydrolase domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17294 in Genome Data Viewer
    Location:
    29B3-29B3; 2-31 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8377035..8378206)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8377035..8378206)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45341 Neighboring gene uncharacterized protein Neighboring gene WD repeat domain 82 Neighboring gene uncharacterized protein Neighboring gene Alanyl-tRNA synthetase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An insect farnesyl phosphatase homologous to the N-terminal domain of soluble epoxide hydrolase. Cao L, et al. Biochem Biophys Res Commun, 2009 Feb 27. PMID 19168029, Free PMC Article
    2. RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins. Lu Z, et al. Genome Biol, 2014 Jan 7. PMID 24393626, Free PMC Article
    3. The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: implications for the regulation of energy metabolism. Pile LA, et al. J Biol Chem, 2003 Sep 26. PMID 12865422
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17294-PA
    NP_609219.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      8377035..8378206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135375.4 → NP_609219.1  uncharacterized protein Dmel_CG17294 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609219.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLM9
      Related
      FBpp0079267
      Conserved Domains (4) summary
      pfam05814
      Location:84 → 136
      DUF843; Baculovirus protein of unknown function (DUF843)
      TIGR01458
      Location:3 → 251
      HAD-SF-IIA-hyp3; HAD-superfamily subfamily IIA hydrolase, TIGR01458
      pfam13242
      Location:175 → 245
      Hydrolase_like; HAD-hyrolase-like
      pfam13344
      Location:7 → 98
      Hydrolase_6; Haloacid dehalogenase-like hydrolase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VLM9 Q9VLM9

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