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    CG17167 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3354991, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17167provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039941
    Locus tag
    Dmel_CG17167
    See related
    AllianceGenome:FB:FBgn0039941
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG40146; Dmel\CG17167
    Summary
    Predicted to enable calcium channel activity and calcium, potassium:sodium antiporter activity. Predicted to be involved in calcium ion transmembrane transport and intracellular calcium ion homeostasis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17167 in Genome Data Viewer
    Location:
    20F4-20F4; 1-66 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (23068301..23081144)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) XHet NW_001848859.1 (47119..59962)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene zydeco Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A single double-strand break system reveals repair dynamics and mechanisms in heterochromatin and euchromatin. Janssen A, et al. Genes Dev, 2016 Jul 15. PMID 27474442, Free PMC Article
    2. An expanded toolkit for gene tagging based on MiMIC and scarless CRISPR tagging in Drosophila. Li-Kroeger D, et al. Elife, 2018 Aug 9. PMID 30091705, Free PMC Article
    3. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
    4. Identification of novel Drosophila neural precursor genes using a differential embryonic head cDNA screen. Brody T, et al. Mech Dev, 2002 Apr. PMID 11900973
    5. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables calcium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calcium, potassium:sodium antiporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17167-PC
    CG17167-PD
    CG17167-PE
    CG17167-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      23068301..23081144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300716.1 → NP_001287645.1  uncharacterized protein Dmel_CG17167, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287645.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A021WW37
      Conserved Domains (2) summary
      TIGR00367
      Location:85 → 390
      TIGR00367; K+-dependent Na+/Ca+ exchanger related-protein
      pfam01699
      Location:86 → 229
      Na_Ca_ex; Sodium/calcium exchanger protein

    2. NM_001015257.3 → NP_001015257.2  uncharacterized protein Dmel_CG17167, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001015257.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      E6PBX2, Q7PLW4
      Conserved Domains (2) summary
      TIGR00367
      Location:85 → 503
      TIGR00367; K+-dependent Na+/Ca+ exchanger related-protein
      pfam01699
      Location:356 → 509
      Na_Ca_ex; Sodium/calcium exchanger protein

    3. NM_001015256.3 → NP_001015256.2  uncharacterized protein Dmel_CG17167, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001015256.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6TP54, Q5LJY0
      Conserved Domains (2) summary
      TIGR00367
      Location:84 → 502
      TIGR00367; K+-dependent Na+/Ca+ exchanger related-protein
      pfam01699
      Location:355 → 508
      Na_Ca_ex; Sodium/calcium exchanger protein

    4. NM_001300717.1 → NP_001287646.1  uncharacterized protein Dmel_CG17167, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287646.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A021WWX0
      Conserved Domains (2) summary
      TIGR00367
      Location:63 → 481
      TIGR00367; K+-dependent Na+/Ca+ exchanger related-protein
      pfam01699
      Location:334 → 487
      Na_Ca_ex; Sodium/calcium exchanger protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A021WW37 A0A021WW37
    A0A021WWX0 A0A021WWX0
    Q5LJY0 Q5LJY0
    Q7PLW4 Q7PLW4

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