U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RpL3 Ribosomal protein L3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41347, updated on 9-Dec-2024

    Summary

    Official Symbol
    RpL3provided by FlyBase
    Official Full Name
    Ribosomal protein L3provided by FlyBase
    Primary source
    FLYBASE:FBgn0020910
    Locus tag
    Dmel_CG4863
    See related
    AllianceGenome:FB:FBgn0020910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:GressD4; CG4863; chr3R:7047878..7048035; Dmel\CG4863; L3; rpL3; Rpl3
    Summary
    A structural constituent of ribosome. Predicted to be involved in translation. Located in cytosolic ribosome. Is expressed in several structures, including adult head; adult heart; embryonic/larval midgut primordium; gut section; and mesoderm. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 2D. Orthologous to several human genes including RPL3 (ribosomal protein L3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RpL3 in Genome Data Viewer
    Location:
    86D8-86D8; 3-50 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11221894..11225173)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7047616..7050895)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene antisense RNA:CR31144 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SCP-containing protein C Neighboring gene uncharacterized protein Neighboring gene GRIP and coiled-coil domain containing 88 kDa

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein L3
    Names
    CG4863-PA
    CG4863-PD
    CG4863-PG
    CG4863-PH
    RpL3-PA
    RpL3-PD
    RpL3-PG
    RpL3-PH

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11221894..11225173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169378.2NP_731548.2  ribosomal protein L3, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731548.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16797, Q0KI83, Q6NNE9, Q9VGR4, Q9VGR5, Q9VGR6
      UniProtKB/TrEMBL
      C6SUV6
      Conserved Domains (1) summary
      PTZ00103
      Location:1400
      PTZ00103; 60S ribosomal protein L3; Provisional
    2. NM_169380.2NP_731550.2  ribosomal protein L3, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731550.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16797
      Conserved Domains (1) summary
      PTZ00103
      Location:1121
      PTZ00103; 60S ribosomal protein L3; Provisional
    3. NM_079592.3NP_524316.1  ribosomal protein L3, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524316.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16797, Q0KI83, Q6NNE9, Q9VGR4, Q9VGR5, Q9VGR6
      UniProtKB/TrEMBL
      C6SUV6
      Related
      FBpp0081822
      Conserved Domains (1) summary
      PTZ00103
      Location:1400
      PTZ00103; 60S ribosomal protein L3; Provisional
    4. NM_169377.2NP_731547.1  ribosomal protein L3, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731547.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16797
      Related
      FBpp0081823
      Conserved Domains (1) summary
      cl00324
      Location:3118
      RplC; Ribosomal protein L3 [Translation, ribosomal structure and biogenesis]