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    xylS transcriptional regulator XylS [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882893, updated on 24-Aug-2024

    Summary

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    Gene symbol
    xylS
    Gene description
    transcriptional regulator XylS
    Locus tag
    PA2519
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2836171..2837127, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene toluate 1,2-dioxygenase electron transfer subunit Neighboring gene toluate 1,2-dioxygenase subunit beta Neighboring gene toluate 1,2-dioxygenase subunit alpha Neighboring gene resistance-nodulation-cell division (RND) divalent metal cation efflux transporter CzcA Neighboring gene resistance-nodulation-cell division (RND) divalent metal cation efflux membrane fusion protein CzcB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comparison of the multiple alleles of xylS carried by TOL plasmids pWW53 and pDK1 and its implications for their evolutionary relationship. Assinder SJ, et al. J Gen Microbiol, 1993 Mar. PMID 8473862
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of toluene catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcriptional regulator XylS
    NP_251209.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2836171..2837127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251209.1 transcriptional regulator XylS [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251209.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9RLI7
      Conserved Domains (2) summary
      pfam12833
      Location:234 → 316
      HTH_18; Helix-turn-helix domain
      pfam14525
      Location:25 → 195
      AraC_binding_2; AraC-binding-like domain
    Nucleotide Protein
    Heading Accession and Version

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