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    recD exodeoxyribonuclease V subunit alpha [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881652, updated on 24-Aug-2024

    Summary

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    Gene symbol
    recD
    Gene description
    exodeoxyribonuclease V subunit alpha
    Locus tag
    PA4283
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4799299..4801464, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene exonuclease SbcD Neighboring gene exonuclease Neighboring gene exodeoxyribonuclease V subunit beta Neighboring gene exodeoxyribonuclease V subunit gamma Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The RecD subunit of the RecBCD enzyme from Escherichia coli is a single-stranded DNA-dependent ATPase. Chen HW, et al. J Biol Chem, 1997 Apr 11. PMID 9092551
    2. Photoaffinity labeling of the recBCD enzyme of Escherichia coli with 8-azidoadenosine 5'-triphosphate. Julin DA, et al. J Biol Chem, 1987 Jul 5. PMID 3298248
    3. Reconstitution of the activities of the RecBCD holoenzyme of Escherichia coli from the purified subunits. Masterson C, et al. J Biol Chem, 1992 Jul 5. PMID 1618858
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables ATP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables endonuclease activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables exodeoxyribonuclease V activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables helicase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exodeoxyribonuclease V complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exodeoxyribonuclease V subunit alpha
    NP_252973.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4799299..4801464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252973.1 exodeoxyribonuclease V subunit alpha [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252973.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5E5QYJ6
      Conserved Domains (1) summary
      TIGR01447
      Location:34 → 695
      recD; exodeoxyribonuclease V, alpha subunit
    Nucleotide Protein
    Heading Accession and Version

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