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    drap-1 Transcription factor CBF/NF-Y/archaeal histone domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179365, updated on 2-Nov-2024

    Summary

    Official Symbol
    drap-1
    Official Full Name
    Transcription factor CBF/NF-Y/archaeal histone domain-containing protein
    Primary source
    WormBase:WBGene00009584
    Locus tag
    CELE_F40F9.7
    See related
    AllianceGenome:WB:WBGene00009584
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA polymerase II general transcription initiation factor activity and core promoter sequence-specific DNA binding activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be part of negative cofactor 2 complex. Predicted to be active in nucleus. Orthologous to human DRAP1 (DR1 associated protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See drap-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (9730106..9734022)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Proton-coupled folate transporter Neighboring gene Glucosidase II subunit alpha Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene EF-hand domain-containing protein Neighboring gene Aquaporin Neighboring gene RING-CH-type domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables core promoter sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of negative cofactor 2 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Transcription factor CBF/NF-Y/archaeal histone domain-containing protein
    NP_001379124.1
    • Confirmed by transcript evidence
    NP_001379388.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9730106..9734022
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392584.1NP_001379388.1  Transcription factor CBF/NF-Y/archaeal histone domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86G95
      Conserved Domains (1) summary
      pfam00808
      Location:38102
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
    2. NM_001392583.1NP_001379124.1  Transcription factor CBF/NF-Y/archaeal histone domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20237
      Conserved Domains (1) summary
      pfam00808
      Location:64128
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone