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    F40F4.7 N-terminal methionine N(alpha)-acetyltransferase NatE [ Caenorhabditis elegans ]

    Gene ID: 180614, updated on 2-Nov-2024

    Summary

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    Official Symbol
    F40F4.7
    Official Full Name
    N-terminal methionine N(alpha)-acetyltransferase NatE
    Primary source
    WormBase:WBGene00018238
    Locus tag
    CELE_F40F4.7
    See related
    AllianceGenome:WB:WBGene00018238
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be involved in mitotic sister chromatid cohesion. Predicted to be located in cytoplasm. Predicted to be part of NatA complex. Orthologous to human NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See F40F4.7 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Sequence:
    Chromosome: X; NC_003284.9 (3243886..3245933, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene C-type LECtin Neighboring gene Protein irg-7 Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitotic sister chromatid cohesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of NatA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    N-terminal methionine N(alpha)-acetyltransferase NatE
    NP_001379902.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      3243886..3245933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392743.1 → NP_001379902.1  N-terminal methionine N(alpha)-acetyltransferase NatE [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20220
      Conserved Domains (1) summary
      COG0456
      Location:122 → 245
      RimI; Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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