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    C13B4.1 Cytochrome b561 domain-containing protein;DOMON domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175104, updated on 2-Nov-2024

    Summary

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    Official Symbol
    C13B4.1
    Official Full Name
    Cytochrome b561 domain-containing protein;DOMON domain-containing protein
    Primary source
    WormBase:WBGene00007545
    Locus tag
    CELE_C13B4.1
    See related
    AllianceGenome:WB:WBGene00007545
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See C13B4.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    13
    Sequence:
    Chromosome: II; NC_003280.10 (14470371..14479633, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Gln Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin carboxyl-terminal hydrolase 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cytochrome b561 domain-containing protein;DOMON domain-containing protein
    NP_001293581.1
    • Confirmed by transcript evidence
    NP_001360457.1
    • Confirmed by transcript evidence
    NP_001360458.1
    • Confirmed by transcript evidence
    NP_001370236.1
    • Confirmed by transcript evidence
    NP_497005.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14470371..14479633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373819.2 → NP_001360458.1  DOMON domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A486WTC7
      Conserved Domains (3) summary
      cd08760
      Location:703 → 916
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09628
      Location:193 → 367
      DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
      smart00664
      Location:398 → 555
      DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

    2. NM_064604.6 → NP_497005.2  DOMON domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497005.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45247
      Conserved Domains (3) summary
      cd08760
      Location:703 → 916
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09628
      Location:193 → 367
      DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
      smart00664
      Location:398 → 555
      DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

    3. NM_001373820.2 → NP_001360457.1  DOMON domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A486WXC8
      Conserved Domains (3) summary
      cd08760
      Location:718 → 931
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09628
      Location:193 → 367
      DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
      smart00664
      Location:398 → 555
      DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins

    4. NM_001306652.3 → NP_001293581.1  Cytochrome b561 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293581.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PRV8
      Conserved Domains (1) summary
      cd08760
      Location:2 → 161
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product

    5. NM_001383994.2 → NP_001370236.1  DOMON domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A5Z2V3
      Conserved Domains (3) summary
      cd08760
      Location:703 → 916
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09628
      Location:193 → 367
      DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins
      smart00664
      Location:398 → 555
      DoH; Possible catecholamine-binding domain present in a variety of eukaryotic proteins
    Nucleotide Protein
    Heading Accession and Version

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