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    srdf-3 Polyprenal reductase [ Caenorhabditis elegans ]

    Gene ID: 179438, updated on 9-Dec-2024

    Summary

    Official Symbol
    srdf-3
    Official Full Name
    Polyprenal reductase
    Primary source
    WormBase:WBGene00007102
    Locus tag
    CELE_B0024.13
    See related
    AllianceGenome:WB:WBGene00007102
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable polyprenol reductase activity. Predicted to be involved in dolichol biosynthetic process; dolichol-linked oligosaccharide biosynthetic process; and polyprenol catabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in Kahrizi syndrome and congenital disorder of glycosylation Iq. Orthologous to human SRD5A3 (steroid 5 alpha-reductase 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See srdf-3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (10320711..10322304)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Putative pseudouridine synthase B0024.11 Neighboring gene Glucosamine 6-phosphate N-acetyltransferase Neighboring gene Cysteine-rich motor neuron 1 protein;Cysteine-rich motor neuron 1 protein-like Neighboring gene ncRNA Neighboring gene ncRNA

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on the CH-CH group of donors IEA
    Inferred from Electronic Annotation
    more info
     
    enables polyprenol reductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables polyprenol reductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in dolichol biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dolichol metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in dolichol-linked oligosaccharide biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dolichol-linked oligosaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in dolichol-linked oligosaccharide biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in polyprenol catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Polyprenal reductase
    NP_001256209.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10320711..10322304
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269280.2NP_001256209.1  Polyprenal reductase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256209.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q17428, Q7JLP4
      Conserved Domains (1) summary
      cl21511
      Location:189309
      PEMT; Phospholipid methyltransferase