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    nhr-31 Nuclear hormone receptor family member nhr-31 [ Caenorhabditis elegans ]

    Gene ID: 177601, updated on 9-Dec-2024

    Summary

    Official Symbol
    nhr-31
    Official Full Name
    Nuclear hormone receptor family member nhr-31
    Primary source
    WormBase:WBGene00003625
    Locus tag
    CELE_C26B2.3
    See related
    AllianceGenome:WB:WBGene00003625
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Involved in embryo development; post-embryonic animal morphogenesis; and response to osmotic stress. Predicted to be located in nucleus. Is expressed in excretory cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See nhr-31 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (8022655..8029513, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Elongator complex protein 4 Neighboring gene Dynactin subunit 4 Neighboring gene Membrane-associated kinase regulator Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding  
    enables DNA-binding transcription factor activity  
    enables metal ion binding  
    enables sequence-specific DNA binding  
    enables zinc ion binding  
    Component Evidence Code Pubs
    located_in nucleus  

    General protein information

    Preferred Names
    Nuclear hormone receptor family member nhr-31
    NP_001379703.1
    • Confirmed by transcript evidence
    NP_741456.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      8022655..8029513 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171391.7 → NP_741456.1  Nuclear hormone receptor family member nhr-31 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741456.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q18192, Q5TYL7, Q8MQB8
      UniProtKB/TrEMBL
      Q9GTI0
      Conserved Domains (2) summary
      cd06157
      Location:259 → 423
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
      cd06960
      Location:82 → 157
      NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers
    2. NM_001392341.1 → NP_001379703.1  Nuclear hormone receptor family member nhr-31 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9GTH9
      Conserved Domains (2) summary
      cd06157
      Location:220 → 384
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
      cd06960
      Location:43 → 118
      NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

    RNA

    1. NR_131580.1 RNA Sequence

      Status: REVIEWED

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