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    Y97E10AL.1 Protein stum homolog [ Caenorhabditis elegans ]

    Gene ID: 190813, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y97E10AL.1
    Official Full Name
    Protein stum homolog
    Primary source
    WormBase:WBGene00022392
    Locus tag
    CELE_Y97E10AL.1
    See related
    AllianceGenome:WB:WBGene00022392
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in proprioception; sensory perception of mechanical stimulus; and taxis. Predicted to be located in membrane. Predicted to be active in sensory dendrite. Orthologous to human STUM (stum, mechanosensory transduction mediator homolog). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y97E10AL.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (7986160..7988336)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Serine aminopeptidase S33 domain-containing protein Neighboring gene ncRNA Neighboring gene Homeobox domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in proprioception IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sensory perception of mechanical stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in taxis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in sensory dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein stum homolog
    NP_505055.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7986160..7988336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072654.7 → NP_505055.4  Protein stum homolog [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q965S1
      Conserved Domains (1) summary
      pfam15795
      Location:89 → 174
      Spec3; Ectodermal ciliogenesis protein
    Nucleotide Protein
    Heading Accession and Version

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