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    acs-24 AMP-binding domain-containing protein;AMP-dependent synthetase/ligase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171945, updated on 2-Nov-2024

    Summary

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    Official Symbol
    acs-24
    Official Full Name
    AMP-binding domain-containing protein;AMP-dependent synthetase/ligase domain-containing protein
    Primary source
    WormBase:WBGene00016324
    Locus tag
    CELE_C32E8.6
    See related
    AllianceGenome:WB:WBGene00016324
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable CoA-ligase activity. Predicted to be located in peroxisome. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See acs-24 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    8
    Sequence:
    Chromosome: I; NC_003279.8 (3774634..3777468)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Innexin-12 Neighboring gene Degenerin-like protein asic-1 Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Resistance to inhibitors of cholinesterase protein 19 Neighboring gene FHA domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Simmer F, et al. Curr Biol, 2002 Aug 6. PMID 12176360
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables CoA-ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    AMP-binding domain-containing protein;AMP-dependent synthetase/ligase domain-containing protein
    NP_001379756.1
    • Confirmed by transcript evidence
    NP_740831.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3774634..3777468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001393259.1 → NP_001379756.1  AMP-dependent synthetase/ligase domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T3B8
      Conserved Domains (1) summary
      cl17068
      Location:57 → 301
      AFD_class_I; Adenylate forming domain, Class I superfamily

    2. NM_170845.5 → NP_740831.1  AMP-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_740831.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ58
      Conserved Domains (1) summary
      cl17068
      Location:57 → 455
      AFD_class_I; Adenylate forming domain, Class I superfamily
    Nucleotide Protein
    Heading Accession and Version

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