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    C40A11.2 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183352, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C40A11.2
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00016545
    Locus tag
    CELE_C40A11.2
    See related
    AllianceGenome:WB:WBGene00016545
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein homooligomerization. Orthologous to human TNFAIP1 (TNF alpha induced protein 1) and KCTD10 (potassium channel tetramerization domain containing 10). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C40A11.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (2146950..2148792)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene G protein-coupled receptor Neighboring gene MATH domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_494198.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2146950..2148792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061797.6 → NP_494198.3  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494198.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZA7
      Conserved Domains (1) summary
      cl38908
      Location:8 → 107
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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