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    ddo-2 D-aspartate oxidase 2 [ Caenorhabditis elegans ]

    Gene ID: 179130, updated on 9-Dec-2024

    Summary

    Official Symbol
    ddo-2
    Official Full Name
    D-aspartate oxidase 2
    Primary source
    WormBase:WBGene00017565
    Locus tag
    CELE_F18E3.7
    See related
    AllianceGenome:WB:WBGene00017565
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables D-aspartate oxidase activity and D-glutamate oxidase activity. Involved in aspartate catabolic process. Predicted to be located in peroxisomal matrix. Predicted to be active in cytoplasm. Is expressed in body wall musculature; intestinal cell; and pharyngeal muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See ddo-2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (7433401..7435032, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene pseudo Neighboring gene Histidine-rich glycoprotein;S39A8 protein Neighboring gene Secreted protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables D-amino-acid oxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables D-amino-acid oxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables D-aspartate oxidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables D-aspartate oxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables D-glutamate oxidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables D-glutamate oxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables FAD binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in D-amino acid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in D-amino acid catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in D-amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in aspartate catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in peroxisomal matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    D-aspartate oxidase 2
    NP_001370668.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7433401..7435032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383337.2NP_001370668.1  D-aspartate oxidase 2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q08I99, Q19564, Q8I7K8
      Conserved Domains (1) summary
      pfam01266
      Location:7327
      DAO; FAD dependent oxidoreductase

    RNA

    1. NR_136371.1 RNA Sequence

      Status: REVIEWED