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    • Showing Current items.

    srh-248 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 186691, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srh-248
    Official Full Name
    Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005454
    Locus tag
    CELE_H05B21.2
    See related
    AllianceGenome:WB:WBGene00005454
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srh-248 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (2954404..2955442, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene pseudo Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reference quantitative transcriptome dataset for adult Caenorhabditis elegans. Piovesan A, et al. Data Brief, 2019 Aug. PMID 31440537, Free PMC Article
    2. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_503803.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2954404..2955442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071402.1 → NP_503803.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503803.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61969
      Conserved Domains (1) summary
      pfam10318
      Location:11 → 307
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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