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    Methig1 methyltransferase hypoxia inducible domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 554292, updated on 28-Oct-2024

    Summary

    Official Symbol
    Methig1provided by MGI
    Official Full Name
    methyltransferase hypoxia inducible domain containing 1provided by MGI
    Primary source
    MGI:MGI:3845761
    See related
    Ensembl:ENSMUSG00000093789 AllianceGenome:MGI:3845761
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    UbiE-YGHL1; Mettl7a2Higd1c; Mettl7a2higd1c; Mettl7a2-Higd1c
    Expression
    Biased expression in kidney adult (RPKM 22.3), lung adult (RPKM 13.6) and 8 other tissues See more
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    Genomic context

    See Methig1 in Genome Data Viewer
    Location:
    15 F1; 15 56.27 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (100251081..100282316)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (100353200..100384435)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53910 Neighboring gene thiol methyltransferase 1A1 Neighboring gene thiol methyltransferase 1A3 Neighboring gene thiol methyltransferase 1A2 Neighboring gene HIG1 domain family, member 1C Neighboring gene predicted gene, 53911 Neighboring gene solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 Neighboring gene STARR-positive B cell enhancer ABC_E4149 Neighboring gene RIKEN cDNA 5330439K02 gene Neighboring gene predicted gene 5475 Neighboring gene STARR-positive B cell enhancer mm9_chr15:100274003-100274304 Neighboring gene STARR-seq mESC enhancer starr_39750 Neighboring gene LETM1 domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    methyltransferase hypoxia inducible domain containing 1
    Names
    Mettl7a2-Higd1c readthrough transcript
    UbiE-YGHL1 fusion protein
    UbiE2-Hig1-4 fusion protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024672.3NP_001019843.1  methyltransferase hypoxia inducible domain containing 1

      See identical proteins and their annotated locations for NP_001019843.1

      Status: PROVISIONAL

      Source sequence(s)
      AK144032
      UniProtKB/TrEMBL
      Q76I26
      Related
      ENSMUSP00000075098.6, ENSMUST00000075675.7
      Conserved Domains (2) summary
      pfam04588
      Location:194242
      HIG_1_N; Hypoxia induced protein conserved region
      pfam08241
      Location:75166
      Methyltransf_11; Methyltransferase domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      100251081..100282316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)