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    CG34310 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740536, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG34310provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085339
    Locus tag
    Dmel_CG34310
    See related
    AllianceGenome:FB:FBgn0085339
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG34310
    Summary
    Predicted to be involved in regulation of endoplasmic reticulum unfolded protein response. Predicted to be located in mitochondrial outer membrane. Is expressed in germline cell; gonad; organism; and primordial germ cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG34310 in Genome Data Viewer
    Location:
    26F6-26F7; 2-21 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6663664..6674780)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6663664..6674780)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ubiquitination factor E4A Neighboring gene uncharacterized protein Neighboring gene cup Neighboring gene Galactose-1-phosphate uridylyltransferase Neighboring gene Serpin 27A Neighboring gene cortex Neighboring gene Non-SMC element 1 Neighboring gene Na[+]/H[+] hydrogen exchanger 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article
    2. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of endoplasmic reticulum unfolded protein response ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34310-PA
    CG34310-PC
    CG34310-PD
    CG34310-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      6663664..6674780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298757.1 → NP_001285686.1  uncharacterized protein Dmel_CG34310, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285686.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYW3, A8DYW4

    2. NM_001103634.2 → NP_001097104.2  uncharacterized protein Dmel_CG34310, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097104.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYW3, A8DYW4

    3. NM_001103633.2 → NP_001097103.1  uncharacterized protein Dmel_CG34310, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097103.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYW3, A8DYW4

    4. NM_001316381.1 → NP_001303310.1  uncharacterized protein Dmel_CG34310, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0S0WGS4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0S0WGS4 A0A0S0WGS4
    A8DYW4 A8DYW4

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