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    CG17778 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 30996, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG17778provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0023534
    Locus tag
    Dmel_CG17778
    See related
    AllianceGenome:FB:FBgn0023534
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH02374; Dmel\CG17778; EG:171D11.5
    Orthologs
    all
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    Genomic context

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    See CG17778 in Genome Data Viewer
    Location:
    1B5-1B5; 1-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (494614..496369)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (388647..390402)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45797 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44891 Neighboring gene antisense RNA:CR44892 Neighboring gene silver

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mef2 induction of the immediate early gene Hr38/Nr4a is terminated by Sirt1 to promote ethanol tolerance. Adhikari P, et al. Genes Brain Behav, 2019 Mar. PMID 29726098, Free PMC Article
    2. Genome-wide identification of neuronal activity-regulated genes in Drosophila. Chen X, et al. Elife, 2016 Dec 9. PMID 27936378, Free PMC Article
    3. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966, Free PMC Article
    4. Drosophila Voltage-Gated Sodium Channels Are Only Expressed in Active Neurons and Are Localized to Distal Axonal Initial Segment-like Domains. Ravenscroft TA, et al. J Neurosci, 2020 Oct 14. PMID 32928889, Free PMC Article
    5. From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. Benos PV, et al. Genome Res, 2001 May. PMID 11337470, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17778-PA
    CG17778-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      494614..496369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297812.1 → NP_001284741.1  uncharacterized protein Dmel_CG17778, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284741.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O46059, Q8MYW2
      Conserved Domains (1) summary
      cl17165
      Location:16 → 108
      SKA2; Spindle and kinetochore-associated protein 2

    2. NM_130490.2 → NP_569846.2  uncharacterized protein Dmel_CG17778, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569846.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O46059, Q8MYW2
      Related
      FBpp0070079, FBtr0070080
      Conserved Domains (1) summary
      cl17165
      Location:16 → 108
      SKA2; Spindle and kinetochore-associated protein 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O46059 O46059
    Q8MYW2 Q8MYW2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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