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    CG5742 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37072, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG5742provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034304
    Locus tag
    Dmel_CG5742
    See related
    AllianceGenome:FB:FBgn0034304
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5742
    Summary
    Predicted to enable signaling receptor binding activity. Predicted to be involved in protein retention in ER lumen. Predicted to be active in cytoplasm. Is expressed in organism. Orthologous to human ANKRD13C (ankyrin repeat domain 13C). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG5742 in Genome Data Viewer
    Location:
    55B9-55B9; 2-84 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18148096..18151410, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14035601..14038915, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene poly(A) binding protein Neighboring gene Essential MCU regulator Neighboring gene adipose Neighboring gene lola like

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables signaling receptor binding  
    Process Evidence Code Pubs
    involved_in protein retention in ER lumen  
    Component Evidence Code Pubs
    is_active_in cytoplasm  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG5742-PA
    CG5742-PB
    CG5742-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18148096..18151410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274139.2 → NP_001261068.1  uncharacterized protein Dmel_CG5742, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261068.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3G2
      Conserved Domains (4) summary
      cd00204
      Location:86 → 175
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam11904
      Location:234 → 534
      GPCR_chapero_1; GPCR-chaperone
      pfam13857
      Location:104 → 156
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
    2. NM_137451.4 → NP_611295.1  uncharacterized protein Dmel_CG5742, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611295.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3G2
      Related
      FBpp0085959
      Conserved Domains (4) summary
      cd00204
      Location:86 → 175
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam11904
      Location:234 → 534
      GPCR_chapero_1; GPCR-chaperone
      pfam13857
      Location:104 → 156
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
    3. NM_001274140.2 → NP_001261069.1  uncharacterized protein Dmel_CG5742, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261069.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KFB5
      Conserved Domains (4) summary
      cd00204
      Location:86 → 175
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam11904
      Location:234 → 534
      GPCR_chapero_1; GPCR-chaperone
      pfam13857
      Location:104 → 156
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
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