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    CG9641 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33502, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG9641provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031483
    Locus tag
    Dmel_CG9641
    See related
    AllianceGenome:FB:FBgn0031483
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG9641
    Summary
    Is expressed in larval muscle system; larval visceral muscle cell; organism; somatic muscle primordium; and trunk visceral muscle primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG9641 in Genome Data Viewer
    Location:
    23C4-23C4; 2-8 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2974859..2976862, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2974859..2976862, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Recombination repair protein 1 Neighboring gene gamma-Tubulin at 23C Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Chromodomain-helicase-DNA-binding protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo. Konev AY, et al. Science, 2007 Aug 24. PMID 17717186, Free PMC Article
    2. Parent-of-origin effects on mRNA expression in Drosophila melanogaster not caused by genomic imprinting. Wittkopp PJ, et al. Genetics, 2006 Jul. PMID 16702434, Free PMC Article
    3. Identification of receptor-tyrosine-kinase-signaling target genes reveals receptor-specific activities and pathway branchpoints during Drosophila development. Leatherbarrow JR, et al. Genetics, 2009 Apr. PMID 19189950, Free PMC Article
    4. Evidence for large domains of similarly expressed genes in the Drosophila genome. Spellman PT, et al. J Biol, 2002. PMID 12144710, Free PMC Article
    5. gammaTub23C interacts genetically with brahma chromatin-remodeling complexes in Drosophila melanogaster. Vázquez M, et al. Genetics, 2008 Oct. PMID 18780727, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9641-PA
    CG9641-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      2974859..2976862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_164518.3 → NP_722865.1  uncharacterized protein Dmel_CG9641, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_722865.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IPZ5
      Related
      FBpp0077361
      Conserved Domains (1) summary
      pfam16012
      Location:148 → 319
      DUF4780; Domain of unknown function (DUF4780)

    2. NM_134887.4 → NP_608731.1  uncharacterized protein Dmel_CG9641, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608731.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VQJ6
      Related
      FBpp0077360
      Conserved Domains (2) summary
      pfam16012
      Location:240 → 411
      DUF4780; Domain of unknown function (DUF4780)
      cl19417
      Location:385 → 504
      FYDLN_acid; Protein of unknown function (FYDLN_acid)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IPZ5 Q8IPZ5
    Q9VQJ6 Q9VQJ6

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