U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BomS5 Bomanin Short 5 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50207, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BomS5provided by FlyBase
    Official Full Name
    Bomanin Short 5provided by FlyBase
    Primary source
    FLYBASE:FBgn0040734
    Locus tag
    Dmel_CG15065
    See related
    AllianceGenome:FB:FBgn0040734
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Bom065; CG15065; CT34936; Dmel\CG15065; IM2-like
    Summary
    Predicted to be involved in defense response. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BomS5 in Genome Data Viewer
    Location:
    55C4-55C4; 2-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18389959..18390242)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14277464..14277747)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Short 3 Neighboring gene Bomanin Tailed 2 Neighboring gene Bomanin Short 6 Neighboring gene Imaginal disc growth factor 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. An effector Peptide family required for Drosophila toll-mediated immunity. Clemmons AW, et al. PLoS Pathog, 2015 Apr. PMID 25915418, Free PMC Article
    2. Short-Form Bomanins Mediate Humoral Immunity in Drosophila. Lindsay SA, et al. J Innate Immun, 2018. PMID 29920489, Free PMC Article
    3. Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytes. Touré H, et al. PLoS Pathog, 2023 Mar. PMID 36972320, Free PMC Article
    4. The Toll pathway mediates Drosophila resilience to Aspergillus mycotoxins through specific Bomanins. Xu R, et al. EMBO Rep, 2023 Jan 9. PMID 36322050, Free PMC Article
    5. Identification of FGF-dependent genes in the Drosophila tracheal system. Stahl M, et al. Gene Expr Patterns, 2007 Jan. PMID 16949886

    See all (58) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in defense response ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    bomanin short 5
    Names
    BomS5-PA
    CG15065-PA
    bomanin 065
    bomanin S5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18389959..18390242
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144109.2 → NP_652366.1  bomanin short 5 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652366.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1ZB63, B7FNR2
      Related
      FBpp0085848
      Conserved Domains (1) summary
      pfam08194
      Location:1 → 36
      DIM; DIM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZB63.1 A1ZB63

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools