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    CG8260 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32521, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG8260provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030684
    Locus tag
    Dmel_CG8260
    See related
    AllianceGenome:FB:FBgn0030684
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8260
    Orthologs
    all
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    Genomic context

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    See CG8260 in Genome Data Viewer
    Location:
    13E14-13E14; 1-51 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15756318..15757767)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15650351..15651800)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Chaperonin containing TCP1 subunit 6 Neighboring gene Mevalonate diphosphate decarboxylase Neighboring gene GTPase regulator associated with FAK Neighboring gene mitochondrial ribosomal protein L3 Neighboring gene RNA polymerase III subunit A Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8260-PA
    CG8260-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15756318..15757767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132841.2 → NP_573069.1  uncharacterized protein Dmel_CG8260, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573069.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXQ1
      Related
      FBpp0073904
      Conserved Domains (4) summary
      smart00225
      Location:97 → 190
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:200 → 287
      BACK; BTB And C-terminal Kelch
      pfam15881
      Location:308 → 387
      DUF4734; Domain of unknown function (DUF4734)
      cl02518
      Location:91 → 182
      BTB; BTB/POZ domain

    2. NM_206723.2 → NP_996446.1  uncharacterized protein Dmel_CG8260, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996446.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KUZ3
      Conserved Domains (4) summary
      smart00225
      Location:91 → 184
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:194 → 281
      BACK; BTB And C-terminal Kelch
      pfam15881
      Location:302 → 381
      DUF4734; Domain of unknown function (DUF4734)
      cl02518
      Location:85 → 176
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KUZ3 Q7KUZ3
    Q9VXQ1 Q9VXQ1

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