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    CG17660 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33347, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17660provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031356
    Locus tag
    Dmel_CG17660
    See related
    AllianceGenome:FB:FBgn0031356
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17660
    Summary
    Predicted to be involved in retrograde transport, endosome to Golgi. Predicted to be active in Golgi apparatus and membrane. Is expressed in adult head. Orthologous to several human genes including TMEM87A (transmembrane protein 87A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17660 in Genome Data Viewer
    Location:
    22B1-22B1; 2-3 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1707132..1710421, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1707132..1710421, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Chronologically inappropriate morphogenesis Neighboring gene antisense RNA:CR44976 Neighboring gene capping protein beta Neighboring gene mitochondrial ribosomal protein L48 Neighboring gene fritz Neighboring gene Replication in mitochondria 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The WD40 repeat protein fritz links cytoskeletal planar polarity to frizzled subcellular localization in the Drosophila epidermis. Collier S, et al. Genetics, 2005 Apr. PMID 15654087, Free PMC Article
    2. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
    3. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in retrograde transport, endosome to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17660-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      1707132..1710421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134768.4 → NP_608612.3  uncharacterized protein Dmel_CG17660 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608612.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q961L7, Q9VQ34
      Related
      FBpp0077578
      Conserved Domains (1) summary
      pfam06814
      Location:160 → 444
      Lung_7-TM_R; Lung seven transmembrane receptor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VQ34 Q9VQ34

    Gene LinkOut

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