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    CG42238 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 7354398, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG42238provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0250867
    Locus tag
    Dmel_CG42238
    See related
    AllianceGenome:FB:FBgn0250867
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9266; Dmel\CG42238
    Orthologs
    all
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    Genomic context

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    See CG42238 in Genome Data Viewer
    Location:
    38F6-39A1; 2-54 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20965520..21052164, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20965520..21052164, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44606 Neighboring gene ncRNA Neighboring gene Integrin betanu subunit Neighboring gene uncharacterized protein Neighboring gene torn and diminished rhabdomeres

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c20981725-20981688 mobile_element_type = transposon:1731{}5381

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42238-PA
    CG42238-PB
    CG42238-PC
    CG42238-PD
    CG42238-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      20965520..21052164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273724.1 → NP_001260653.1  uncharacterized protein Dmel_CG42238, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260653.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX8

    2. NM_001144373.2 → NP_001137845.1  uncharacterized protein Dmel_CG42238, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137845.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX7, Q95S78

    3. NM_001316403.1 → NP_001303332.1  uncharacterized protein Dmel_CG42238, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX8

    4. NM_001144374.2 → NP_001137846.1  uncharacterized protein Dmel_CG42238, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137846.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX8

    5. NM_001273725.1 → NP_001260654.1  uncharacterized protein Dmel_CG42238, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260654.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7YZX7 B7YZX7
    B7YZX8 B7YZX8

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