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    beat-IIa beaten path IIa [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42086, updated on 9-Dec-2024

    Summary

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    Official Symbol
    beat-IIaprovided by FlyBase
    Official Full Name
    beaten path IIaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038498
    Locus tag
    Dmel_CG14334
    See related
    AllianceGenome:FB:FBgn0038498
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE17794; beat IIa; Beat-IIa; CG14334; CG14335; CT33965; Dmel\CG14334
    Summary
    Enables cell adhesion receptor activity. Involved in synapse assembly. Is active in postsynaptic membrane. Is expressed in several structures, including embryonic brain; embryonic stomatogastric nervous system; longitudinal visceral muscle fiber; stomatogastric nervous system primordium; and visceral muscle primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See beat-IIa in Genome Data Viewer
    Location:
    90A2-90A3; 3-60 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17320004..17366119, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (13145726..13191841, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43489 Neighboring gene long non-coding RNA:CR43490 Neighboring gene long non-coding RNA:CR44256 Neighboring gene long non-coding RNA:CR43196 Neighboring gene Brf RNA polymerase III subunit Neighboring gene lute

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of cell-type-specific chromatin modifications and gene expression in Drosophila neurons that direct reproductive behavior. Palmateer CM, et al. PLoS Genet, 2021 Apr. PMID 33901168, Free PMC Article
    2. Complex formation of immunoglobulin superfamily molecules Side-IV and Beat-IIb regulates synaptic specificity. Osaka J, et al. Cell Rep, 2024 Feb 27. PMID 38381608
    3. Two sequential gene expression programs bridged by cell division support long-distance collective cell migration. Sun J, et al. Development, 2024 May 15. PMID 38646822, Free PMC Article
    4. HLH54F is required for the specification and migration of longitudinal gut muscle founders from the caudal mesoderm of Drosophila. Ismat A, et al. Development, 2010 Sep. PMID 20736287, Free PMC Article
    5. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c17348235-17346744 mobile_element_type = transposon:F{}1374

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cell adhesion receptor activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in synapse assembly IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beaten path IIa
    Names
    CG14334-PA
    CG14334-PB
    beat-IIa-PA
    beat-IIa-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      17320004..17366119 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079660.4 → NP_524384.3  beaten path IIa, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524384.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BMG9, Q9VEL3
      Related
      FBpp0082894
      Conserved Domains (1) summary
      PTZ00491
      Location:209 → 261
      PTZ00491; major vault protein; Provisional

    2. NM_001300446.1 → NP_001287375.1  beaten path IIa, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287375.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BMG9, Q9VEL3
      Conserved Domains (1) summary
      PTZ00491
      Location:209 → 261
      PTZ00491; major vault protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9BMG9 Q9BMG9

    Gene LinkOut

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