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    CG16974 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34713, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG16974provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032479
    Locus tag
    Dmel_CG16974
    See related
    AllianceGenome:FB:FBgn0032479
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT35580; Dmel\CG16974; Dromel_CG16974_FBtr0080489_mORF
    Summary
    Is expressed in adult head; embryonic myoblast; and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG16974 in Genome Data Viewer
    Location:
    34A8-34A8; 2-47 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13183849..13191979, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13183849..13191979, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Alg7 dolichyl-phosphate N-acetylglucosaminephosphotransferase Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene Radial spoke head protein 1 Neighboring gene ER degradation enhancer, mannosidase alpha-like 2 Neighboring gene uncharacterized protein Neighboring gene Phosphoethanolamine cytidylyltransferase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved A-to-I RNA editing with non-conserved recoding expands the candidates of functional editing sites. Duan Y, et al. Fly (Austin), 2024 Dec. PMID 38889318, Free PMC Article
    2. Comparative analysis of the Kekkon molecules, related members of the LIG superfamily. MacLaren CM, et al. Dev Genes Evol, 2004 Jul. PMID 15179511
    3. Kek-6: A truncated-Trk-like receptor for Drosophila neurotrophin 2 regulates structural synaptic plasticity. Ulian-Benitez S, et al. PLoS Genet, 2017 Aug. PMID 28846707, Free PMC Article
    4. Long Oskar Controls Mitochondrial Inheritance in Drosophila melanogaster. Hurd TR, et al. Dev Cell, 2016 Dec 5. PMID 27923120, Free PMC Article
    5. Comparative genomic analysis of novel conserved peptide upstream open reading frames in Drosophila melanogaster and other dipteran species. Hayden CA, et al. BMC Genomics, 2008 Feb 1. PMID 18237443, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16974-PA
    CG16974-PB
    kekkon-like

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13183849..13191979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259089.2 → NP_001246018.1  uncharacterized protein Dmel_CG16974, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246018.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK28
      Conserved Domains (4) summary
      cd00116
      Location:246 → 433
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:229 → 252
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:371 → 431
      LRR_8; Leucine rich repeat
      cl11960
      Location:714 → 761
      Ig; Immunoglobulin domain

    2. NM_135766.3 → NP_609610.2  uncharacterized protein Dmel_CG16974, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609610.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK28
      Related
      FBpp0080067
      Conserved Domains (4) summary
      cd00116
      Location:246 → 433
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:229 → 252
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:371 → 431
      LRR_8; Leucine rich repeat
      cl11960
      Location:714 → 761
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95S21 Q95S21
    Q9VK28 Q9VK28

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