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    TDA3 Tda3p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856400, updated on 2-Nov-2024

    Summary

    Official Symbol
    TDA3
    Official Full Name
    Tda3p
    Primary source
    SGD:S000001051
    Locus tag
    YHR009C
    See related
    AllianceGenome:SGD:S000001051; FungiDB:YHR009C; VEuPathDB:YHR009C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    BTN3
    Summary
    Predicted to enable oxidoreductase activity. Involved in retrograde transport, endosome to Golgi. Located in late endosome. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See TDA3 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (124109..125680, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene superoxide dismutase SOD2 Neighboring gene ribosomal 60S subunit protein L27A Neighboring gene putative serine--tRNA ligase DIA4

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in retrograde transport, endosome to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in retrograde transport, endosome to Golgi IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in retrograde transport, endosome to Golgi IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in retrograde transport, endosome to Golgi IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in late endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in late endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Tda3p
    NP_011873.1
    • Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      124109..125680 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179139.1NP_011873.1  TPA: Tda3p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011873.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKV4, P38758
      UniProtKB/TrEMBL
      A6ZSR3, B3LSD0
      Conserved Domains (1) summary
      COG0665
      Location:251516
      DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]