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    LOC3290180 neurotrophin 1 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 3290180, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC3290180
    Gene description
    neurotrophin 1
    See related
    VectorBase:AGAMI1_007382
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    SPZ2; AGAP029552
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC3290180 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (101728695..101754508, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5667305 Neighboring gene uncharacterized LOC1277088 Neighboring gene transmembrane protease serine 11D Neighboring gene trypsin Neighboring gene serine protease 1 Neighboring gene uncharacterized LOC5667298 Neighboring gene coagulation factor X Neighboring gene Tie-like receptor tyrosine kinase Neighboring gene uncharacterized LOC133392168

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Toll binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurotrophin 1
    Names
    AGAP006483-PA
    spaetzle-like cytokine 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      101728695..101754508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_557166.5 → XP_557166.4  neurotrophin 1

      UniProtKB/TrEMBL
      A0A453Z031
    Nucleotide Protein Strain
    Heading Accession and Version

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