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    mirr iroquois-class homeodomain protein mirror [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1275837, updated on 12-Oct-2024

    Summary

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    Gene symbol
    mirr
    Gene description
    iroquois-class homeodomain protein mirror
    See related
    VectorBase:AGAMI1_011860
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005011
    Orthologs
    fruit fly all
    NEW
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    Genomic context

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    See mirr in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (76470816..76531754)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein SOWAHB Neighboring gene Pyrroline-5-carboxylate reductase-like 2 Neighboring gene homeobox protein araucan Neighboring gene N-acetylgalactosamine kinase Neighboring gene N-acetylgalactosamine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein araucan
    Names
    AGAP005011-PA
    Iroquois-class homeodomain protein irx

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      76470816..76531754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_315118.5 → XP_315118.4  homeobox protein araucan

      See identical proteins and their annotated locations for XP_315118.4

      UniProtKB/TrEMBL
      Q7Q7U9
      Conserved Domains (2) summary
      COG5576
      Location:202 → 284
      COG5576; Homeodomain-containing transcription factor [Transcription]
      pfam05920
      Location:229 → 268
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein Strain
    Heading Accession and Version

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