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    HnRNP-K Heterogeneous nuclear ribonucleoprotein K [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1275841, updated on 22-Jun-2024

    Summary

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    Gene symbol
    HnRNP-K
    Gene description
    Heterogeneous nuclear ribonucleoprotein K
    See related
    VectorBase:AGAMI1_001384
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005015
    Orthologs
    fruit fly all
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    Genomic context

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    See HnRNP-K in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (76675886..76700128, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene N-acetylgalactosamine kinase Neighboring gene RNA polymerase II-associated protein spaghetti Neighboring gene protein inturned Neighboring gene lysM and putative peptidoglycan-binding domain-containing protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein K homolog; heterogeneous nuclear ribonucleoprotein K
    Names
    AGAP005015-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      76675886..76700128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_315123.5 → XP_315123.4  heterogeneous nuclear ribonucleoprotein K isoform X2

      See identical proteins and their annotated locations for XP_315123.4

      UniProtKB/TrEMBL
      Q7PPG0
      Conserved Domains (3) summary
      cd22432
      Location:57 → 118
      KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
      cd22434
      Location:365 → 435
      KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
      cl00098
      Location:130 → 197
      KH-I; K homology (KH) RNA-binding domain, type I

    2. XM_061651681.1 → XP_061507665.1  heterogeneous nuclear ribonucleoprotein K homolog isoform X3

    3. XM_061651680.1 → XP_061507664.1  heterogeneous nuclear ribonucleoprotein K isoform X1

    4. XM_061651682.1 → XP_061507666.1  heterogeneous nuclear ribonucleoprotein K isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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