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    LOC1276638 protein alan shepard [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1276638, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1276638
    Gene description
    protein alan shepard
    See related
    VectorBase:AGAMI1_014814
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005964
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1276638 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (92998396..93202386, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC1276633 Neighboring gene large proline-rich protein BAG6 Neighboring gene uncharacterized LOC133391383 Neighboring gene adult-specific cuticular protein ACP-20 Neighboring gene cuticle protein 19 Neighboring gene cuticle protein 19 Neighboring gene adult-specific cuticular protein ACP-20 Neighboring gene putative phospholipase B-like lamina ancestor Neighboring gene uncharacterized LOC1276646 Neighboring gene tRNA N(3)-methylcytidine methyltransferase Mettl2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A) binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(U) RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein alan shepard
    Names
    AGAP005964-PA
    AGAP005964-PB

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      92998396..93202386 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061645397.1 → XP_061501381.1  protein alan shepard isoform X6

      UniProtKB/TrEMBL
      A0A1S4GQT3

    2. XM_061645403.1 → XP_061501387.1  protein alan shepard isoform X9

      UniProtKB/TrEMBL
      A0A1S4GQT3

    3. XM_061645399.1 → XP_061501383.1  protein alan shepard isoform X7

      UniProtKB/TrEMBL
      A0A1S4GQT3

    4. XM_061645402.1 → XP_061501386.1  protein alan shepard isoform X8

      UniProtKB/TrEMBL
      A7UTZ3

    5. XM_061645394.1 → XP_061501378.1  protein alan shepard isoform X4

      UniProtKB/TrEMBL
      A0A1S4GQT3

    6. XM_061645392.1 → XP_061501376.1  protein alan shepard isoform X3

      UniProtKB/TrEMBL
      A7UTZ3

    7. XM_061645391.1 → XP_061501375.1  protein alan shepard isoform X2

      UniProtKB/TrEMBL
      A0A1S4GQT3

    8. XM_061645386.1 → XP_061501370.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A1S4GQT3

    9. XM_061645398.1 → XP_061501382.1  protein alan shepard isoform X6

      UniProtKB/TrEMBL
      A0A1S4GQT3

    10. XM_061645388.1 → XP_061501372.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A1S4GQT3

    11. XM_061645400.1 → XP_061501384.1  protein alan shepard isoform X7

      UniProtKB/TrEMBL
      A0A1S4GQT3

    12. XM_061645387.1 → XP_061501371.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A1S4GQT3

    13. XM_061645408.1 → XP_061501392.1  protein alan shepard isoform X14

      UniProtKB/TrEMBL
      A0A1S4GQT3

    14. XM_061645390.1 → XP_061501374.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A1S4GQT3

    15. XM_061645401.1 → XP_061501385.1  protein alan shepard isoform X7

      UniProtKB/TrEMBL
      A0A1S4GQT3

    16. XM_061645389.1 → XP_061501373.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A1S4GQT3

    17. XM_061645406.1 → XP_061501390.1  protein alan shepard isoform X12

      UniProtKB/TrEMBL
      A7UTZ3

    18. XM_061645395.1 → XP_061501379.1  protein alan shepard isoform X5

      UniProtKB/TrEMBL
      A0A1S4GQT3

    19. XM_061645407.1 → XP_061501391.1  protein alan shepard isoform X13

      UniProtKB/TrEMBL
      A0A1S4GQT3

    20. XM_061645404.1 → XP_061501388.1  protein alan shepard isoform X10

      UniProtKB/TrEMBL
      A0A1S4GQT3

    21. XM_061645405.1 → XP_061501389.1  protein alan shepard isoform X11

      UniProtKB/TrEMBL
      A0A1S4GQT3

    22. XM_061645396.1 → XP_061501380.1  protein alan shepard isoform X5

      UniProtKB/TrEMBL
      A0A1S4GQT3

    23. XM_061645415.1 → XP_061501399.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    24. XM_061645410.1 → XP_061501394.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    25. XM_061645411.1 → XP_061501395.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    26. XM_061645414.1 → XP_061501398.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    27. XM_061645412.1 → XP_061501396.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    28. XM_061645413.1 → XP_061501397.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    29. XM_061645416.1 → XP_061501400.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A1S4GQT3

    30. XM_061645418.1 → XP_061501402.1  protein alan shepard isoform X16

      UniProtKB/TrEMBL
      Q7Q694

    31. XM_061645417.1 → XP_061501401.1  protein alan shepard isoform X16

      UniProtKB/TrEMBL
      Q7Q694
    Nucleotide Protein Strain
    Heading Accession and Version

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