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    rogdi rogdi atypical leucine zipper [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1277238, updated on 22-Jun-2024

    Summary

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    Gene symbol
    rogdi
    Gene description
    rogdi atypical leucine zipper
    See related
    VectorBase:AGAMI1_013782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP006653
    Orthologs
    fruit fly all
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    Genomic context

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    See rogdi in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (104520748..104529618)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene enoyl-CoA delta isomerase 2 Neighboring gene mitochondrial ribosomal protein S28 Neighboring gene ubiquitin specific protease 10 Neighboring gene toll-like receptor 13 Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Neighboring gene uncharacterized LOC4576183

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of RAVE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein rogdi
    Names
    AGAP006653-PA
    AGAP006653-PB
    Protein rogdi

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      104520748..104529618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001688892.2 → XP_001688944.1  protein rogdi isoform X2

      See identical proteins and their annotated locations for XP_001688944.1

      UniProtKB/TrEMBL
      A7UUH2
      Conserved Domains (1) summary
      pfam10259
      Location:131 → 361
      Rogdi_lz; Rogdi leucine zipper containing protein

    2. XM_061648568.1 → XP_061504552.1  protein rogdi isoform X1

    3. XM_316684.5 → XP_316684.3  protein rogdi isoform X3

      See identical proteins and their annotated locations for XP_316684.3

      UniProtKB/TrEMBL
      Q7PPB1
      Conserved Domains (1) summary
      pfam10259
      Location:15 → 203
      Rogdi_lz; Rogdi leucine zipper containing protein

    4. XM_061648569.1 → XP_061504553.1  protein rogdi isoform X3

      UniProtKB/TrEMBL
      Q7PPB1
    Nucleotide Protein Strain
    Heading Accession and Version

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