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    emp epithelial membrane protein [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1275121, updated on 22-Jun-2024

    Summary

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    Gene symbol
    emp
    Gene description
    epithelial membrane protein
    See related
    VectorBase:AGAMI1_005870
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    SCRB9; a-emp; AGAP004846
    Orthologs
    fruit fly all
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    Genomic context

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    See emp in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (68223122..68247502, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene J domain-containing protein CG6693 Neighboring gene Protein phosphatase 1 regulatory subunit 15 Neighboring gene scavenger receptor class B member 1 Neighboring gene scavenger receptor class B member 1 Neighboring gene cytokine-inducible SH2-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    scavenger receptor class B member 1
    Names
    AGAP004846-PA
    AGAP004846-PB
    AGAP004846-PC
    Class B Scavenger Receptor (CD36 domain)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      68223122..68247502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001688510.2 → XP_001688562.1  scavenger receptor class B member 1 isoform X2

      See identical proteins and their annotated locations for XP_001688562.1

      UniProtKB/TrEMBL
      A7UTD1
      Conserved Domains (1) summary
      pfam01130
      Location:15 → 471
      CD36; CD36 family

    2. XM_061644367.1 → XP_061500351.1  scavenger receptor class B member 1 isoform X2

      UniProtKB/TrEMBL
      A7UTD1

    3. XM_314346.5 → XP_314346.4  scavenger receptor class B member 1 isoform X1

      See identical proteins and their annotated locations for XP_314346.4

      UniProtKB/TrEMBL
      Q7PHM8, Q7Q950
      Conserved Domains (1) summary
      pfam01130
      Location:25 → 481
      CD36; CD36 family

    4. XM_061644366.1 → XP_061500350.1  scavenger receptor class B member 1 isoform X1

      UniProtKB/TrEMBL
      Q7PHM8, Q7Q950

    5. XM_061644365.1 → XP_061500349.1  scavenger receptor class B member 1 isoform X1

      UniProtKB/TrEMBL
      Q7PHM8, Q7Q950

    6. XM_061644368.1 → XP_061500352.1  scavenger receptor class B member 1 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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