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    Sym symplekin scaffold protein [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1273349, updated on 8-Oct-2024

    Summary

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    Gene symbol
    Sym
    Gene description
    symplekin scaffold protein
    See related
    VectorBase:AGAMI1_000564
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP002618
    Orthologs
    fruit fly all
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    Genomic context

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    See Sym in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (23995618..23999826, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC1273351 Neighboring gene peroxisomal N(1)-acetyl-spermine/spermidine oxidase Neighboring gene protein Aster-B Neighboring gene uncharacterized LOC1273348 Neighboring gene uncharacterized LOC1273347

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of mRNA cleavage and polyadenylation specificity factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    symplekin
    Names
    AGAP002618-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      23995618..23999826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_312315.6 → XP_312315.5  symplekin

      See identical proteins and their annotated locations for XP_312315.5

      UniProtKB/TrEMBL
      Q7QCG6
      Conserved Domains (3) summary
      pfam11935
      Location:117 → 345
      DUF3453; Domain of unknown function (DUF3453)
      pfam12295
      Location:927 → 1107
      Symplekin_C; Symplekin tight junction protein C terminal
      sd00044
      Location:66 → 96
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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