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    LOC5667536 uncharacterized LOC5667536 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 5667536, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC5667536
    Gene description
    uncharacterized LOC5667536
    See related
    VectorBase:AGAMI1_003723
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP029582
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    Genomic context

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    See LOC5667536 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (5939580..5954834, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 3 Neighboring gene ATP-dependent DNA helicase DDX11 Neighboring gene Histone acetyltransferase Tip60 Neighboring gene Spliceosomal protein on the X Neighboring gene probable nuclear hormone receptor HR38 Neighboring gene titin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tumor necrosis factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of NF-kappaB transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of centriole replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of NF-kappaB transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein autoubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in aggresome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC5667536
    Names
    AGAP001541-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      5939580..5954834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061648021.1 → XP_061504005.1  uncharacterized protein LOC5667536 isoform X1

      UniProtKB/TrEMBL
      A0A453Z045

    2. XM_061648024.1 → XP_061504008.1  uncharacterized protein LOC5667536 isoform X2

      UniProtKB/TrEMBL
      A0A453Z045

    3. XM_061648020.1 → XP_061504004.1  uncharacterized protein LOC5667536 isoform X1

      UniProtKB/TrEMBL
      A0A453Z045

    4. XM_061648022.1 → XP_061504006.1  uncharacterized protein LOC5667536 isoform X1

      UniProtKB/TrEMBL
      A0A453Z045

    5. XM_061648025.1 → XP_061504009.1  uncharacterized protein LOC5667536 isoform X2

      UniProtKB/TrEMBL
      A0A453Z045

    6. XM_061648023.1 → XP_061504007.1  uncharacterized protein LOC5667536 isoform X1

      UniProtKB/TrEMBL
      A0A453Z045
    Nucleotide Protein Strain
    Heading Accession and Version

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