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    LOC1274317 AN1-type zinc finger protein 6 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1274317, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1274317
    Gene description
    AN1-type zinc finger protein 6
    See related
    VectorBase:AGAMI1_006604
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP003649
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1274317 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (40331233..40362843, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase II subunit RPB2-like Neighboring gene RNA polymerase II subunit RpII140 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha Neighboring gene tyrosine-protein kinase Fer

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AN1-type zinc finger protein 6
    Names
    AGAP003649-PA
    AGAP003649-PB
    AGAP003649-PC

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      40331233..40362843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061648120.1 → XP_061504104.1  AN1-type zinc finger protein 6 isoform X3

      UniProtKB/TrEMBL
      F5HLC8, Q7QAK6

    2. XM_061648119.1 → XP_061504103.1  AN1-type zinc finger protein 6 isoform X2

    3. XM_061648117.1 → XP_061504101.1  AN1-type zinc finger protein 6 isoform X1

    4. XM_313417.6 → XP_313417.5  AN1-type zinc finger protein 6 isoform X3

      See identical proteins and their annotated locations for XP_313417.5

      UniProtKB/TrEMBL
      F5HLC8, Q7QAK6
      Conserved Domains (2) summary
      smart00154
      Location:176 → 213
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:11 → 32
      zf-A20; A20-like zinc finger

    5. XM_061648114.1 → XP_061504098.1  AN1-type zinc finger protein 6 isoform X1

    6. XM_061648121.1 → XP_061504105.1  AN1-type zinc finger protein 6 isoform X3

      UniProtKB/TrEMBL
      F5HLC8, Q7QAK6

    7. XM_003436499.2 → XP_003436547.1  AN1-type zinc finger protein 6 isoform X3

      See identical proteins and their annotated locations for XP_003436547.1

      UniProtKB/TrEMBL
      F5HLC8, Q7QAK6
      Conserved Domains (2) summary
      smart00154
      Location:176 → 213
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:11 → 32
      zf-A20; A20-like zinc finger

    8. XM_061648116.1 → XP_061504100.1  AN1-type zinc finger protein 6 isoform X1

    9. XM_061648118.1 → XP_061504102.1  AN1-type zinc finger protein 6 isoform X1

    10. XM_003436498.2 → XP_003436546.1  AN1-type zinc finger protein 6 isoform X3

      See identical proteins and their annotated locations for XP_003436546.1

      UniProtKB/TrEMBL
      F5HLC8, Q7QAK6
      Conserved Domains (2) summary
      smart00154
      Location:176 → 213
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:11 → 32
      zf-A20; A20-like zinc finger
    Nucleotide Protein Strain
    Heading Accession and Version

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