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    LOC1272905 acyl-CoA Delta-9 desaturase [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1272905, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1272905
    Gene description
    acyl-CoA Delta-9 desaturase
    See related
    VectorBase:AGAMI1_006033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP003051
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1272905 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (31326170..31333098, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC11175976 Neighboring gene acyl-CoA Delta-9 desaturase Neighboring gene small glutamine-rich tetratricopeptide repeat-containing protein beta Neighboring gene odorant receptor 22c

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables stearoyl-CoA 9-desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in unsaturated fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-CoA Delta-9 desaturase
    Names
    AGAP003051-PA
    AGAP003051-PB
    stearoyl-CoA desaturase (delta-9 desaturase)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      31326170..31333098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_311819.6 → XP_311819.3  acyl-CoA Delta-9 desaturase

      See identical proteins and their annotated locations for XP_311819.3

      UniProtKB/TrEMBL
      Q7QDC3
      Conserved Domains (2) summary
      cd03505
      Location:91 → 329
      Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
      cl00615
      Location:52 → 237
      Membrane-FADS-like; The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins. They are present in all groups of organisms with the ...

    2. XM_061640939.1 → XP_061496923.1  acyl-CoA Delta-9 desaturase

      UniProtKB/TrEMBL
      Q7QDC3

    3. XM_061640938.1 → XP_061496922.1  acyl-CoA Delta-9 desaturase

      UniProtKB/TrEMBL
      Q7QDC3
    Nucleotide Protein Strain
    Heading Accession and Version

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