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    LOC1275100 tetraspanin-9 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1275100, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1275100
    Gene description
    tetraspanin-9
    See related
    VectorBase:AGAMI1_003177
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP004861
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1275100 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (68118964..68138794)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene Transient receptor potential cation channel A1 Neighboring gene ferlin misfire Neighboring gene aminopeptidase N-like Neighboring gene serine protease snake

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-9
    Names
    AGAP004861-PA
    Tetraspanin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      68118964..68138794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_314330.4 → XP_314330.2  tetraspanin-9

      See identical proteins and their annotated locations for XP_314330.2

      UniProtKB/TrEMBL
      Q7Q961
      Conserved Domains (1) summary
      pfam00335
      Location:11 → 257
      Tetraspannin; Tetraspanin family

    2. XM_061644370.1 → XP_061500354.1  tetraspanin-9

      UniProtKB/TrEMBL
      Q7Q961

    3. XM_061644373.1 → XP_061500357.1  tetraspanin-9

      UniProtKB/TrEMBL
      Q7Q961

    4. XM_061644372.1 → XP_061500356.1  tetraspanin-9

      UniProtKB/TrEMBL
      Q7Q961
    Nucleotide Protein Strain
    Heading Accession and Version

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