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    LOC1271771 protein ILRUN [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271771, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1271771
    Gene description
    protein ILRUN
    See related
    VectorBase:AGAMI1_010822
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000469
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1271771 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (8158994..8163368, complement)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene cell division cycle and apoptosis regulator protein 1 Neighboring gene patatin like phospholipase domain containing sws Neighboring gene mucin-2 Neighboring gene probable methylthioribulose-1-phosphate dehydratase Neighboring gene F-box/LRR-repeat protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ILRUN
    Names
    AGAP000469-PA
    AGAP000469-PB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      8158994..8163368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003436955.2 → XP_003437003.1  protein ILRUN

      See identical proteins and their annotated locations for XP_003437003.1

      UniProtKB/TrEMBL
      F5HJI2
      Conserved Domains (2) summary
      cd14349
      Location:33 → 73
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      pfam16158
      Location:90 → 195
      N_BRCA1_IG; Ig-like domain from next to BRCA1 gene
    Nucleotide Protein Strain
    Heading Accession and Version

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