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    PF3D7_1124400 U6 snRNA-associated Sm-like protein LSm1, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810802, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1124400
    Gene description
    U6 snRNA-associated Sm-like protein LSm1, putative
    Locus tag
    PF3D7_1124400
    See related
    PlasmoDB:PF3D7_1124400; VEuPathDB:PF3D7_1124400
    Gene type
    protein coding
    RNA name
    U6 snRNA-associated Sm-like protein LSm1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1124400 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Sequence:
    Chromosome: 11; NC_037282.1 (964675..965360, complement)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like protein, putative Neighboring gene conserved protein, unknown function Neighboring gene pyruvate dehydrogenase E1 component subunit alpha Neighboring gene ethanolamine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA cap binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA splicing ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within deadenylation-dependent decapping of nuclear-transcribed mRNA ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within mRNA processing ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    U6 snRNA-associated Sm-like protein LSm1, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      964675..965360 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347890.2 → XP_001347926.2  U6 snRNA-associated Sm-like protein LSm1, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347926.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UXF6, A0A024VXS4, A0A024WH50, A0A024X4Z1, A0A0L1IFL6, A0A0L7KGY2, A0A2I0C006, Q8IIB9, W4IE92, W4IU80, W7FKF2, W7JLX1
      Conserved Domains (1) summary
      cd01728
      Location:7 → 82
      LSm1; Like-Sm protein 1
    Nucleotide Protein
    Heading Accession and Version

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