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    PF3D7_1228500 RNA pseudouridylate synthase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811328, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1228500
    Gene description
    RNA pseudouridylate synthase, putative
    Locus tag
    PF3D7_1228500
    See related
    PlasmoDB:PF3D7_1228500; VEuPathDB:PF3D7_1228500
    Gene type
    protein coding
    RNA name
    RNA pseudouridylate synthase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1228500 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Sequence:
    Chromosome: 12; NC_037284.1 (1158554..1160062)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene NIMA related kinase 1 Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene acidic basic repeat antigen Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    RNA pseudouridylate synthase, putative
    XP_001350682.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1158554..1160062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350646.1 → XP_001350682.1  RNA pseudouridylate synthase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350682.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V4P1, A0A024VP61, A0A024VW91, A0A024WNM0, A0A024X563, A0A0L1I9H4, A0A0L7K835, A0A0L7LYJ9, Q8I5D3, W4IE67, W4J2Y8, W7EXH2, W7G1Y4, W7JUW7, W7KHY4
      Conserved Domains (1) summary
      cl00130
      Location:225 → 341
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
    Nucleotide Protein
    Heading Accession and Version

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