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    PF3D7_1231600 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811357, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1231600
    Gene description
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
    Locus tag
    PF3D7_1231600
    See related
    PlasmoDB:PF3D7_1231600; VEuPathDB:PF3D7_1231600
    Gene type
    protein coding
    RNA name
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1231600 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (1301098..1304604, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene amino acid transporter, putative Neighboring gene mitosis protein dim1, putative Neighboring gene conserved protein, unknown function Neighboring gene asparagine-rich protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables ATP-dependent activity, acting on RNA ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of spliceosomal complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
    XP_001350711.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1301098..1304604 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350675.1 → XP_001350711.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350711.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1IE35, A0A0L7M849, A0A8S9VFP0, Q8I5A4
      Conserved Domains (1) summary
      COG1643
      Location:435 → 1149
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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