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    PF3D7_1220400 debranching enzyme-associated ribonuclease, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811248, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1220400
    Gene description
    debranching enzyme-associated ribonuclease, putative
    Locus tag
    PF3D7_1220400
    See related
    PlasmoDB:PF3D7_1220400; VEuPathDB:PF3D7_1220400
    Gene type
    protein coding
    RNA name
    debranching enzyme-associated ribonuclease, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1220400 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (816909..818468)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene cell cycle associated protein, putative Neighboring gene hypothetical protein Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    debranching enzyme-associated ribonuclease, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      816909..818468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350566.1 → XP_001350602.1  debranching enzyme-associated ribonuclease, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350602.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V519, A0A024WM17, A0A0L1I4N7, A0A2I0BYB1, Q8I5K9
      Conserved Domains (2) summary
      pfam04676
      Location:428 → 516
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
      cl00228
      Location:280 → 416
      HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...
    Nucleotide Protein
    Heading Accession and Version

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