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    PF3D7_1347500 DNA/RNA-binding protein Alba 4 [ Plasmodium falciparum 3D7 ]

    Gene ID: 813796, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1347500
    Gene description
    DNA/RNA-binding protein Alba 4
    Locus tag
    PF3D7_1347500
    See related
    PlasmoDB:PF3D7_1347500; VEuPathDB:PF3D7_1347500
    Gene type
    protein coding
    RNA name
    DNA/RNA-binding protein Alba 4
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1347500 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    2
    Sequence:
    Chromosome: 13; NC_004331.3 (1897983..1899362, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene ethanolamine-phosphate cytidylyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ALBA4 modulates its stage-specific interactions and specific mRNA fates during Plasmodium yoelii growth and transmission. Muñoz EE, et al. Mol Microbiol, 2017 Oct. PMID 28787542, Free PMC Article
    2. PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites. Chêne A, et al. Nucleic Acids Res, 2012 Apr. PMID 22167473, Free PMC Article
    3. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    4. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
    5. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables RNA binding HDA PubMed 
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables mRNA binding HDA PubMed 
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of translation ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in food vacuole HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA/RNA-binding protein Alba 4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1897983..1899362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350153.1 → XP_001350189.1  DNA/RNA-binding protein Alba 4 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350189.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A5K1K8Y8
      UniProtKB/TrEMBL
      A0A024V140, A0A024VJN3, A0A024W1M0, A0A024WJU3, A0A024X1V9, A0A0L7KBC4, W4IB71, W4J1Y1, W7EVQ0, W7FJ19, W7J6D6, W7K9B7
      Conserved Domains (1) summary
      cd21101
      Location:108 → 368
      MAF1-ALBA4_C; C-terminal domain of mitochondrial association factor 1 (MAF1), Alba4, and related proteins
    Nucleotide Protein
    Heading Accession and Version

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