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    PF3D7_1333000 20 kDa chaperonin [ Plasmodium falciparum 3D7 ]

    Gene ID: 814150, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1333000
    Gene description
    20 kDa chaperonin
    Locus tag
    PF3D7_1333000
    See related
    PlasmoDB:PF3D7_1333000; VEuPathDB:PF3D7_1333000
    Gene type
    protein coding
    RNA name
    20 kDa chaperonin
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1333000 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Sequence:
    Chromosome: 13; NC_004331.3 (1355285..1357194)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 6, putative Neighboring gene isoleucine--tRNA ligase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene ubiquitin-activating enzyme

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. P. falciparum cpn20 is a bona fide co-chaperonin that can replace GroES in E. coli. Vitlin Gruber A, et al. PLoS One, 2013. PMID 23326533, Free PMC Article
    2. Organelle-specific cochaperonins in apicomplexan parasites. Sato S, et al. Mol Biochem Parasitol, 2005 Jun. PMID 15926202
    3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    4. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables protein-folding chaperone binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    20 kDa chaperonin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1355285..1357194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350025.1 → XP_001350061.1  20 kDa chaperonin [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350061.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V2Z1, A0A024W1A9, A0A024WK86, A0A024X2X4, A0A0L7KD80, A0A2I0BVZ7, Q50JA7, Q8IDZ8, W4IBR3, W4IX18, W7F7G6, W7FL67, W7JII2
      Conserved Domains (1) summary
      cd00320
      Location:60 → 153
      cpn10; Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts. It ...
    Nucleotide Protein
    Heading Accession and Version

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