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    PF3D7_1308200 carbamoyl phosphate synthetase [ Plasmodium falciparum 3D7 ]

    Gene ID: 814023, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1308200
    Gene description
    carbamoyl phosphate synthetase
    Locus tag
    PF3D7_1308200
    See related
    PlasmoDB:PF3D7_1308200; VEuPathDB:PF3D7_1308200
    Gene type
    protein coding
    RNA name
    carbamoyl phosphate synthetase
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1308200 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    2
    Sequence:
    Chromosome: 13; NC_004331.3 (361166..368495, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene CCAAT-binding transcription factor, putative Neighboring gene 40S ribosomal protein S27 Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    carbamoyl phosphate synthetase
    XP_001349809.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      361166..368495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349773.1 → XP_001349809.1  carbamoyl phosphate synthetase [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349809.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1I5F4, A0A0L7KFT6, Q8IEN3, W7JPU6
      Conserved Domains (3) summary
      cd01744
      Location:474 → 654
      GATase1_CPSase; Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II
      smart01097
      Location:15 → 205
      CPSase_sm_chain; Carbamoyl-phosphate synthase small chain, CPSase domain
      TIGR01369
      Location:677 → 1245
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit
    Nucleotide Protein
    Heading Accession and Version

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