U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PF3D7_1340600 RNA lariat debranching enzyme, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814189, updated on 12-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PF3D7_1340600
    Gene description
    RNA lariat debranching enzyme, putative
    Locus tag
    PF3D7_1340600
    See related
    PlasmoDB:PF3D7_1340600; VEuPathDB:PF3D7_1340600
    Gene type
    protein coding
    RNA name
    RNA lariat debranching enzyme, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PF3D7_1340600 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (1618001..1619728, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene ras-related protein Rab-11B Neighboring gene mitochondrial pyruvate carrier protein 1, putative

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RNA lariat debranching enzyme, putative
    XP_001350130.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1618001..1619728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350094.1 → XP_001350130.1  RNA lariat debranching enzyme, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350130.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V2M9, A0A024VK99, A0A024W2B5, A0A024X1P8, A0A0L7KAT0, A0A5K1K8J0, W4J1M9, W7EVZ4, W7FC69, W7J6H7, W7KAI6
      Conserved Domains (3) summary
      PTZ00341
      Location:291 → 439
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
      cd00844
      Location:3 → 260
      MPP_Dbr1_N; Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain
      pfam05011
      Location:444 → 501
      DBR1; Lariat debranching enzyme, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials