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    PF3D7_1306400 26S protease regulatory subunit 10B, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814012, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1306400
    Gene description
    26S protease regulatory subunit 10B, putative
    Locus tag
    PF3D7_1306400
    See related
    PlasmoDB:PF3D7_1306400; VEuPathDB:PF3D7_1306400
    Gene type
    protein coding
    RNA name
    26S protease regulatory subunit 10B, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1306400 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (297178..298359, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene SAM dependent methyltransferase, putative Neighboring gene MORN repeat protein, putative Neighboring gene V-type proton ATPase subunit H, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
    2. Proteomic analysis of extracellular vesicles from a Plasmodium falciparum Kenyan clinical isolate defines a core parasite secretome. Abdi A, et al. Wellcome Open Res, 2017. PMID 28944300, Free PMC Article
    3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within proteasome regulatory particle assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular vesicle HDA PubMed 
    located_in food vacuole HDA PubMed 
    located_in nucleus HDA PubMed 
    part_of proteasome regulatory particle, base subcomplex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    26S protease regulatory subunit 10B, putative
    XP_001349791.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      297178..298359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349755.1 → XP_001349791.1  26S protease regulatory subunit 10B, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349791.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V3D6, A0A024VMB1, A0A024W2V3, A0A024WMH7, A0A024X2M8, A0A0L1I5B7, A0A0L7KFK1, A0A0L7M625, Q8IEQ1, W4IDW8, W4IYE0, W7EWR8, W7FDC5, W7J8J7, W7JPS9
      Conserved Domains (1) summary
      COG1222
      Location:12 → 390
      RPT1; ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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